CRAN Package Check Results for Package pbatR

Last updated on 2014-04-23 07:55:04.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.2-9 3.28 34.72 38.01 NOTE
r-devel-linux-x86_64-debian-gcc 2.2-9 3.73 35.34 39.06 NOTE
r-devel-linux-x86_64-fedora-clang 2.2-9 63.44 NOTE
r-devel-linux-x86_64-fedora-gcc 2.2-9 57.75 NOTE
r-devel-osx-x86_64-clang 2.2-9 64.49 NOTE
r-devel-osx-x86_64-gcc 2.2-9 NOTE
r-devel-windows-ix86+x86_64 2.2-9 20.00 55.00 75.00 NOTE
r-patched-linux-x86_64 2.2-9 3.79 35.31 39.10 NOTE
r-patched-solaris-sparc 2.2-9 348.30 NOTE
r-patched-solaris-x86 2.2-9 95.40 NOTE
r-release-linux-ix86 2.2-9 6.00 57.00 63.00 NOTE
r-release-linux-x86_64 2.2-9 3.79 34.74 38.53 NOTE
r-release-osx-x86_64-mavericks 2.2-9 WARN
r-release-windows-ix86+x86_64 2.2-9 22.00 58.00 80.00 NOTE
r-oldrel-windows-ix86+x86_64 2.2-9 26.00 61.00 87.00 NOTE

Check Details

Version: 2.2-9
Check: DESCRIPTION meta-information
Result: NOTE
    Package listed in more than one of Depends, Imports, Suggests, Enhances:
     ‘tcltk’
    A package should be listed in only one of these fields.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-osx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.2-9
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘rootSolve’ which was already attached by Depends.
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ‘rootSolve’ ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-osx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.2-9
Check: foreign function calls
Result: NOTE
    Call with DUP = FALSE:
     .C("powerR", as.integer(numOffspring), as.integer(numParents),
     as.integer(numFamilies), as.integer(additionalOffspringPhenos),
     as.integer(ascertainment), as.integer(modelGen), as.integer(modelTest),
     as.double(afreqMarker), as.double(penAA), as.double(penAB),
     as.double(penBB), as.double(heritability), as.double(contsAscertainmentLower),
     as.double(contsAscertainmentUpper), as.double(pDiseaseAlleleGivenMarkerAllele),
     as.double(afreqDSL), as.double(qnorm(1 - alpha/2)), as.double(offset),
     as.integer(numSim), as.integer(ITERATION_KILLER), result,
     DUP = FALSE)
    DUP = FALSE is deprecated and may be disabled in future versions of R.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-osx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 2.2-9
Check: PDF version of manual
Result: WARNING
    LaTeX errors when creating PDF version.
    This typically indicates Rd problems.
    LaTeX errors found:
    ! LaTeX Error: File `upquote.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    48d099a1/Rd2.tex:8: ==> Fatal error occurred, no output PDF file produced!
Flavor: r-release-osx-x86_64-mavericks